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Francisella tularensis subsp. novicida U112

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Gene Functional categories
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Alternative Views 6-frame translation
Experimental Data Transposon insertions Proteome

dnaA

Transposon insertions
Strain Transposon Type Sequence Confirmation Direction Position Position relative to ORF Junction info Position info BEI catalog #
No transposons
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Identification
Gene Name dnaA
Locus Tag FTN_0001
Accession # YP_897666.1
Genbank 118496616
pid 118496616
Structural Characteristics
Location 145 - 1620
Length 491 aa   1476 nt
Strand +
G+C 0.3103
KEGG Pathways
External Annotations
NCBI
MetaCyc
Synteny Tool
Functional Characteristics
Description chromosomal replication initiator protein
Note -
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PFAM -
Prosite
Label PS Number Domain Name Type Domain Definition
M1 PS01008 DNAA PATTERN DnaA protein signature

TMHMM
Transmembrane Domains Start End N-Terminus
0

SignalP
Signal Score Position
N 0.000 0

GO
Rank Cellular Component Molecular Function Biological Process
1 GO:0043226-organelle GO:0005623-cell GO:0043234-protein complex GO:0005488-binding GO:0009987-cellular process GO:0007582-physiological process
2 GO:0043228-non-membrane-bound organelle GO:0005622-intracellular GO:0003676-nucleic acid binding GO:0008152-metabolism
3 GO:0003677-DNA binding GO:0050875-cellular physiological process GO:0006139-nucleobase, nucleoside, nucleotide and nucleic acid metabolism
4 GO:0043229-intracellular organelle GO:0003688-DNA replication origin binding GO:0006259-DNA metabolism GO:0008151-cell growth and/or maintenance
5 GO:0008283-cell proliferation
6 GO:0043232-intracellular non-membrane-bound organelle GO:0007049-cell cycle
7 GO:0005694-chromosome GO:0000067-DNA replication and chromosome cycle
8 GO:0005657-replication fork
10 GO:0030894-replisome
11 GO:0005658-alpha DNA polymerase:primase complex GO:0006260-DNA replication

COG
COG Number Domain Name Domain Desc COG Category E Value Percent Identity Alignment Length Query Begin Query End Domain Begin Domain End
COG0593 DnaA ATPase involved in DNA replication initiation DNA replication, recombination, and repair 2e-113 43.15 482 4 485 1 406

PSort
Final Localization Final Score HMMTop Signal Cytoplasmmic Score Cytoplasmic Membrane Score Periplasmic Score Outer Membrane Score Extracellular Score
Cytoplasmic 8.96 No internal helices found No signal peptide detected 8.96 0.51 0.26 0.01 0.26

Sequences   [View surrounding nucleotides]
Protein Sequence
MTTWDKCLKKIKKNLSTFEYKTWIKPIHVEQNSNLFTVYCNNEYFKKHIKSKYGNLILSTIQECHGNDLIIEYSNKKFSGKKITEVITAG
PQANFFSTTSVEIKDESEDTKVVQEPKISKKSNTKDFSSSQELFGFDEAMLITAKEDEEYSFGLPLKEKYVFDSFVVGDANKIARAAAMQ
VSINPGKLHNPLFIYGGSGLGKTHLMQAIGNHAREVNPNAKIIYTNSEQFIKDYVNSIRLQDQDEFQRVYRSADILLIDDIQFIAGKEGT
AQEFFHTFNALYENGKQIILTSDKYPNEIEGLEERLVSRFGYGLTVSVDMPDLETRIAILLKKAHDLGQKLPNETAAFIAENVRTNVREL
EGALNRVLTTSKFNHKDPTIEVAQACLRDVIKIQEKKVKIDNIQKVVADFYRIRVKDLTSNQRSRNIARPRQIAMSLARELTSHSLPEIG
NAFGGRDHTTVMHAVKAITKLRQSNTSISDDYELLLDKISR

Nucleotide Sequence
ATGACTACATGGGATAAATGTTTAAAAAAAATAAAAAAAAACCTTTCTACGTTTGAGTATAAGACGTGGATAAAGCCTATCCATGTGGAG
CAAAATAGTAACTTATTCACAGTTTACTGTAACAATGAATATTTCAAAAAACATATAAAATCTAAGTATGGAAATCTTATTTTATCAACA
ATCCAAGAGTGTCATGGTAATGATTTAATTATTGAATATTCTAATAAAAAATTCTCTGGCAAAAAAATTACTGAGGTTATCACAGCTGGA
CCACAAGCTAATTTTTTTAGCACAACAAGTGTTGAGATAAAAGATGAATCAGAAGATACAAAAGTAGTACAAGAACCTAAGATATCAAAG
AAGTCTAATACTAAAGACTTTTCTTCATCACAAGAGTTATTCGGTTTTGACGAAGCTATGCTAATTACAGCAAAAGAAGATGAGGAATAC
TCTTTTGGTTTACCGTTAAAAGAAAAATATGTTTTTGATAGTTTTGTTGTTGGAGATGCTAACAAAATTGCTAGAGCAGCAGCTATGCAG
GTATCGATAAATCCAGGTAAATTACATAACCCTTTATTCATTTATGGTGGTAGTGGTTTAGGTAAAACTCACTTAATGCAAGCAATAGGT
AATCATGCAAGAGAAGTTAATCCTAATGCCAAAATTATTTATACAAATTCAGAACAATTTATTAAAGATTATGTAAATTCTATTCGTTTA
CAAGATCAAGATGAGTTTCAAAGAGTTTATAGATCTGCGGATATACTTTTGATTGATGATATTCAATTTATTGCTGGTAAAGAGGGTACT
GCTCAGGAGTTTTTCCATACTTTTAATGCATTGTATGAAAATGGTAAACAGATAATTCTAACTAGTGATAAGTATCCAAATGAAATAGAA
GGACTTGAAGAAAGACTAGTTTCGCGTTTTGGTTATGGTTTGACAGTTTCTGTTGATATGCCAGATTTAGAAACTAGAATTGCTATCTTG
CTCAAAAAAGCTCATGATTTAGGTCAGAAATTACCTAACGAAACAGCAGCTTTTATTGCTGAGAATGTACGTACTAATGTCAGAGAGTTA
GAAGGTGCTCTAAATAGGGTTCTTACTACCTCTAAATTTAATCATAAAGATCCTACTATCGAAGTAGCACAAGCTTGCTTAAGAGATGTT
ATAAAAATACAAGAAAAGAAAGTAAAAATAGATAATATCCAAAAGGTTGTTGCTGATTTTTATAGAATCAGGGTAAAAGATTTAACTTCT
AATCAAAGAAGTAGAAATATAGCTAGACCAAGACAGATAGCAATGAGTTTAGCACGTGAACTAACATCACATAGTTTGCCAGAAATAGGC
AATGCTTTTGGTGGTAGAGACCATACGACAGTTATGCATGCTGTCAAAGCTATAACTAAATTAAGACAAAGCAATACTTCAATATCGGAT
GATTATGAGTTGCTTTTAGATAAAATTTCTCGTTAA

Nucleotide and Protein Sequence
atgactacatgggataaatgtttaaaaaaaataaaaaaaaacctttctacgtttgagtataagacgtggataaagcctatccatgtggag
 M  T  T  W  D  K  C  L  K  K  I  K  K  N  L  S  T  F  E  Y  K  T  W  I  K  P  I  H  V  E 
caaaatagtaacttattcacagtttactgtaacaatgaatatttcaaaaaacatataaaatctaagtatggaaatcttattttatcaaca
 Q  N  S  N  L  F  T  V  Y  C  N  N  E  Y  F  K  K  H  I  K  S  K  Y  G  N  L  I  L  S  T 
atccaagagtgtcatggtaatgatttaattattgaatattctaataaaaaattctctggcaaaaaaattactgaggttatcacagctgga
 I  Q  E  C  H  G  N  D  L  I  I  E  Y  S  N  K  K  F  S  G  K  K  I  T  E  V  I  T  A  G 
ccacaagctaatttttttagcacaacaagtgttgagataaaagatgaatcagaagatacaaaagtagtacaagaacctaagatatcaaag
 P  Q  A  N  F  F  S  T  T  S  V  E  I  K  D  E  S  E  D  T  K  V  V  Q  E  P  K  I  S  K 
aagtctaatactaaagacttttcttcatcacaagagttattcggttttgacgaagctatgctaattacagcaaaagaagatgaggaatac
 K  S  N  T  K  D  F  S  S  S  Q  E  L  F  G  F  D  E  A  M  L  I  T  A  K  E  D  E  E  Y 
tcttttggtttaccgttaaaagaaaaatatgtttttgatagttttgttgttggagatgctaacaaaattgctagagcagcagctatgcag
 S  F  G  L  P  L  K  E  K  Y  V  F  D  S  F  V  V  G  D  A  N  K  I  A  R  A  A  A  M  Q 
gtatcgataaatccaggtaaattacataaccctttattcatttatggtggtagtggtttaggtaaaactcacttaatgcaagcaataggt
 V  S  I  N  P  G  K  L  H  N  P  L  F  I  Y  G  G  S  G  L  G  K  T  H  L  M  Q  A  I  G 
aatcatgcaagagaagttaatcctaatgccaaaattatttatacaaattcagaacaatttattaaagattatgtaaattctattcgttta
 N  H  A  R  E  V  N  P  N  A  K  I  I  Y  T  N  S  E  Q  F  I  K  D  Y  V  N  S  I  R  L 
caagatcaagatgagtttcaaagagtttatagatctgcggatatacttttgattgatgatattcaatttattgctggtaaagagggtact
 Q  D  Q  D  E  F  Q  R  V  Y  R  S  A  D  I  L  L  I  D  D  I  Q  F  I  A  G  K  E  G  T 
gctcaggagtttttccatacttttaatgcattgtatgaaaatggtaaacagataattctaactagtgataagtatccaaatgaaatagaa
 A  Q  E  F  F  H  T  F  N  A  L  Y  E  N  G  K  Q  I  I  L  T  S  D  K  Y  P  N  E  I  E 
ggacttgaagaaagactagtttcgcgttttggttatggtttgacagtttctgttgatatgccagatttagaaactagaattgctatcttg
 G  L  E  E  R  L  V  S  R  F  G  Y  G  L  T  V  S  V  D  M  P  D  L  E  T  R  I  A  I  L 
ctcaaaaaagctcatgatttaggtcagaaattacctaacgaaacagcagcttttattgctgagaatgtacgtactaatgtcagagagtta
 L  K  K  A  H  D  L  G  Q  K  L  P  N  E  T  A  A  F  I  A  E  N  V  R  T  N  V  R  E  L 
gaaggtgctctaaatagggttcttactacctctaaatttaatcataaagatcctactatcgaagtagcacaagcttgcttaagagatgtt
 E  G  A  L  N  R  V  L  T  T  S  K  F  N  H  K  D  P  T  I  E  V  A  Q  A  C  L  R  D  V 
ataaaaatacaagaaaagaaagtaaaaatagataatatccaaaaggttgttgctgatttttatagaatcagggtaaaagatttaacttct
 I  K  I  Q  E  K  K  V  K  I  D  N  I  Q  K  V  V  A  D  F  Y  R  I  R  V  K  D  L  T  S 
aatcaaagaagtagaaatatagctagaccaagacagatagcaatgagtttagcacgtgaactaacatcacatagtttgccagaaataggc
 N  Q  R  S  R  N  I  A  R  P  R  Q  I  A  M  S  L  A  R  E  L  T  S  H  S  L  P  E  I  G 
aatgcttttggtggtagagaccatacgacagttatgcatgctgtcaaagctataactaaattaagacaaagcaatacttcaatatcggat
 N  A  F  G  G  R  D  H  T  T  V  M  H  A  V  K  A  I  T  K  L  R  Q  S  N  T  S  I  S  D 
gattatgagttgcttttagataaaatttctcgttaa
 D  Y  E  L  L  L  D  K  I  S  R  * 


BLAST Database:



nuc prot
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