Thank you for visiting the Francisella Genome Browser. This is an older tool and has been selected for eventual shutdown. Our newer tool, PGAT, provides the same functionality with many additional features and more up-to-date annotation. Transposon mutants are now searchable using our Transposon Mutant Browser. We are encouraging all users to transition to these new tools. If you depend on a specific feature in this browser that is not available in PGAT, please contact us at email address.

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Genomes

Organism Strain Institute Last Updated NCBI Files
Francisella tularensis subsp. holarcticaLVS LLNL 2006-03-30 NC_007880
Francisella tularensis subsp. holarctica FTAFTA BioHealthBase 2007-12-13 NC_009749
Francisella tularensis subsp. holarctica OSU18OSU18 Baylor College of Medicine 2006-09-25 NC_008369
Francisella tularensis subsp. novicida U112 U112 UWGC 2006-08-18 NC_008601
Francisella tularensis subsp. tularensis FSC198FSC 198 University of Birmingham 2006-07-25 NC_008245
Francisella tularensis subsp. tularensis SCHU S4Schu 4 Swedish Defense 2006-01-17 NC_006570
Francisella tularensis subsp. tularensis WY96-3418WY96-3418 BioHealthBase 2007-03-31 NC_009257

Tools

Name Description
Get surrounding sequence Given a gene, other genome feature, or genome coordinate, displays in FASTA format the surrounding sequence a specified number of nucleotides upstream and downstream
Synteny Tool Analyze potential regions of local synteny between the Francisella genomes and any other published bacterial genome